Bellinger River snapping turtle (Myuchelys_georgesi)
| Genome & Transcriptome Data | NCBI BioProject: PRJNA1003540 |
[Publication:] Holly Nelson, Katherine Farquharson, Arthur Georges, Elspeth McLennan, Jane DeGabriel, Melissa Giese, Christopher Ormond, Michael McFadden, Adam Skidmore, Katherine Belov, Carolyn Hogg, A genomic framework to assist conservation breeding and reintroduction success: A case study of a critically endangered turtle
Download data through hyperlinks above or using the AWS Command Line Interface
aws s3 cp --no-sign-request s3://threatenedspecies/Myuchelys_georgesi/myugeo.md5sum .
aws s3 cp --no-sign-request s3://threatenedspecies/Myuchelys_georgesi/rMyugeo1.global.21072024.fasta.gz .
aws s3 cp --no-sign-request s3://threatenedspecies/Myuchelys_georgesi/rMyugeo1.pri.20230808.fasta.gz .
aws s3 cp --no-sign-request s3://threatenedspecies/CMyuchelys_georgesi/rMyugeo1.fgenesh.29072024.gff3.gz .
aws s3 cp --no-sign-request s3://threatenedspecies/Myuchelys_georgesi/README.txt .
aws s3 sync --no-sign-request s3://threatenedspecies/Myuchelys_georgesi/ .
| Assembly Statistics | |
|---|---|
| Assembly | PacBio HiFi |
| Assembler program | hifiasm v0.16 |
| Genome size | 2.0Gb |
| # Scaffold | 129 |
| Scaffold N50 | 123.5Mb |
| Largest Scaffold | 311.5Mb |
| BUSCO | v5.2.2 vertebrata odb10 |
|---|---|
| Genes | 3354 |
| Complete | 95.4% |
| Single Copy | 94.9% |
| Duplicated | 0.5% |
| Fragmented | 2.1% |
| Missing | 2.5% |
This genome data was supported by funding from the Threatened Species Initiative (TSI), NCRIS funded Bioplatforms Australia, and the Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science (CE200100012). Image was supplied by Shane Ruming